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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932156.1_cds_XP_016478744.1_70357
CDS Infomation

[gene=LOC107800111] [db_xref=GeneID:107800111] [protein=aspartate--tRNA ligase 2, cytoplasmic-like] [protein_id=XP_016478744.1] [location=join(26048..26545,27583..27693,27884..27997,28586..28876,28944..29054,29242..29304,31688..31767,31890..32005,33192..33306,33549..33675)] [gbkey=CDS]
Sequence

ATGGCCTCGGATTCAGAAGAAGGCAGCAATCAAGGTAAAAAACTTTCCAAAAAAGAAGCC
GCAAAGCTCGAACGCCAGCGCAAACGTCAAGAGGCTGCTGCAGCTGCTGCCACCACTGCC
TTATCCGCTGTCTCCGTTGATGAAGGACCGGACCCGCTTGCCAGCAACTACGGCGACGTT
CTGCTCAACGACCTGCAATCCAAGGTGTTGTCGGGTCGCCAATGGACCAAAGTCGAGTTA
CTTGCTCCGGTAATGAGGGACCAGGTGGTCCTGATTCGGGGTAGGGTTCAGACGATCCGT
CCCGTTGGGAAGAAGATAGCTTTCGTTGTCGTGAGGGAACGAGGTTTCACAGTGCAGTGC
GTGTTGACGGTAAAGCCAGAGTTGGTGAGTGCGCAGATGGTGAAATTCGCAACTAGTCTG
AGCAAAGAGTCCATTGTTGATGTTGAAGGTGTTGTTACTGTCCCCGAGAAGCCAATTACG
GGCGCTACTCAACAACAGGTGGAAGTTCAGATAAGCAAACTTTATTGTGTCAACAAGGCT
GTGCCAACACTGCCAATTAATATCGAGGATGCTGCTAGAAGCGAGGTGGAGATAGAACAA
GCTTTAGAGAAAGGAGAGCAGCTTGTTCGTGTAAATCAGGATACTCGTTTGAACTACAGA
ATTCTAGATATGCGCACACCTGCAAATCAAGGGATCTTCCGCATCCAATGTCAAGTTGAA
AATATATTTAGGCAGTTTTTGCTGTCTGAAGGTTTTGTTGGAATCCATACCCCAAAATTG
ATTGGAGGGTCTAGTGAAGGTGGTTCAGCTGTATTCAGACTGGATTACAAAGGGCAACCT
GCATGTCTGGCACAGTCACCTCAGCTTCACAAACAAATGGCAATATGTGGTGATTTTGGC
CGTGTGTTTGAAATTGGTCCCGTTTTTAGAGCAGAAGATTCTTTCACACACAGACATCTG
TGTGAGTTTACAGGTCTTGATGTCGAAATGGAGATTAAAGAGCACTATTCAGAGGTCATG
GATATTGTTGACCGCTTATTTGTGACAATTTTTGATAGTTTGAATGACAAATGCAAAAAG
GAACTGGAAGCCATTGGAAGGCAATATCCTTTTGAACCTTTGAGGTATTTTCGGGGAGAT
AAAAAGACCTTACGGCTTACATTTGAAGAGGGAGTTCAAATGTTGAAGGAAGCTGGTATT
GAAGTCGATCCGTTTGGGGACCTAAATACAGAATCAGAAAGAAAGCTGGGCCAGCTTGTT
GCAAAGAAGTATGGAACTGAATTTTATATACTTCACAAATATCCCTTGGCAGTTCGTCCA
TTCTATACTATGCCATGTTATGATAATCCAGCTTACAGTAATTCTTTTGATGTCTTCATT
AGAGGAGAAGAAATTATCTCCGGAGCTCAGCGTGTCCATGTACCTGAGTTCTTGGCAAAA
CGTGCTGAAGAATGTGGAATTGATGTGAAGACAATATCAACATATATTGATTCTTTCCGA
TATGGTGCTCCTCCTCACGGTGGATTTGGAGTCGGACTGGAGCGTGTGGTGATGCTTTTC
TGCGCGCTCAACAATATTCGCAAGACATCACTTTTCCCTCGTGACCCACAAAGGATTGCC
CCCTGA

Peptide Sequence

PEP ID

XP_016478744.1
PEP Infomation

PREDICTED: aspartate--tRNA ligase 2, cytoplasmic-like [Nicotiana tabacum]
Sequence

MASDSEEGSNQGKKLSKKEAAKLERQRKRQEAAAAAATTALSAVSVDEGPDPLASNYGDV
LLNDLQSKVLSGRQWTKVELLAPVMRDQVVLIRGRVQTIRPVGKKIAFVVVRERGFTVQC
VLTVKPELVSAQMVKFATSLSKESIVDVEGVVTVPEKPITGATQQQVEVQISKLYCVNKA
VPTLPINIEDAARSEVEIEQALEKGEQLVRVNQDTRLNYRILDMRTPANQGIFRIQCQVE
NIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVFRLDYKGQPACLAQSPQLHKQMAICGDFG
RVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKEHYSEVMDIVDRLFVTIFDSLNDKCKK
ELEAIGRQYPFEPLRYFRGDKKTLRLTFEEGVQMLKEAGIEVDPFGDLNTESERKLGQLV
AKKYGTEFYILHKYPLAVRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQRVHVPEFLAK
RAEECGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQRIA
P

Transcript Sequence

Gene sequence data has not been registered.